Long-term monitoring of Ziphius cavirostris behavior using 3D tracking from fixed hydrophone arrays off Southern California. Baggett, Lauren M., Eric R. Snyder, Alba Solsona-Berga, Isabelle J. Curran, Sean M. Wiggins, John A. Hildebrand, Ana Širović, Kaitlin E. Frasier, Simone Baumann-Pickering . Scientific Reports. 2025. 15: 40859 (2025)
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Date Published:
  • November 19, 2025
Publication:Ocean:Region:Species:Methods:
Vessel strike encounter risk model informs mortality risk for endangered North Atlantic right whales along the United States east coast. Blondin, Hannah; Garrison, Lance P.; Adams, Jeffrey D.; Roberts, Jason J.; Good, Caroline P.; Gahm, Meghan P.; Lisi, Niki E.; Patterson, Eric M.. Scientific Reports. 2025. 736 (2025). https://doi.org/10.1038/s41598-024-84886-z
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Date Published:
  • January 3, 2025
Publication:Ocean:Region:Species:Methods:
Long-term passive acoustic recordings track the changing distribution of North Atlantic right whales (Eubalaena glacialis) from 2004 to 2014. Davis, G. E., M.F. Baumgartner, J.M. Bonnell, J. Bell, C. Berchok, J. Bort Thornton, S. Brault, G. Buchanan, R.A. Charif, D. Cholewiak, C.W. Clark, P. Corkeron, J. Delarue, K. Dudzinski, L. Hatch, J. Hildebrand, L. Hodge, H. Klinck, S. Kraus, B. Martin, D.K. Mellinger, H. Moors-Murphy, S. Nieukirk, D.P. Nowacek, S. Parks, A.J. Read, A.N. Rice, D. Risch, A. Širović, M. Soldevilla, K. Stafford, J.E. Stanistreet, E. Summers, S. Todd, A. Warde, and S.M. Van Parijs. Scientific Reports. 2017. 7:13460
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Date Published:
  • October 18, 2017
Publication:Ocean:Region:Species:Methods:
The MAMBAT framework for acoustic tracking of multiple animals. Gruden, P., E-M. Nosal, and E.E. Henderson. Scientific Reports. 2025. 15:16505
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Date Published:
  • May 13, 2025

Passive acoustic monitoring (PAM) is a key technology for studying marine mammal populations. PAM typically generates large volumes of data that contain signals from multiple overlapping sources. To extract meaningful information from these data, automated tools are required that can cope with multiple sources, missed detections, and false alarms. This paper presents the Multiple-Animal Model-Based Acoustic Tracking (MAMBAT) framework, which integrates model-based localization with Bayesian multi-target tracking to automatically track multiple sound sources using acoustic data from wide baseline arrays. MAMBAT leverages a “Track-before-Localize” strategy followed by a “Localize-then-Track” strategy that does not require detection, classification, or association steps. The framework’s effectiveness is demonstrated through application to real-world datasets that contain multiple sperm whales from two ocean basins. MAMBAT advances our ability to monitor marine mammal distribution, abundance, and behavior, with potential to provide valuable information for conservation and management efforts.

Publication:Ocean:Region:Methods:
Hidden Markov models reveal complexity in the diving behaviour of short-finned pilot whales. Quick, N.J., S. Isojunno, D. Sadykova, M. Bowers, D.P. Nowacek, and A.J. Read.. Scientific Reports. 2017. 7:45765
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Date Published:
  • March 31, 2017

Diving behaviour of short-finned pilot whales is often described by two states; deep foraging and shallow, non-foraging dives. However, this simple classification system ignores much of the variation that occurs during subsurface periods. We used multi-state hidden Markov models (HMM) to characterize states of diving behaviour and the transitions between states in short-finned pilot whales. We used three parameters (number of buzzes, maximum dive depth and duration) measured in 259 dives by digital acoustic recording tags (DTAGs) deployed on 20 individual whales off Cape Hatteras, North Carolina, USA. The HMM identified a four-state model as the best descriptor of diving behaviour. The state-dependent distributions for the diving parameters showed variation between states, indicative of different diving behaviours. Transition probabilities were considerably higher for state persistence than state switching, indicating that dive types occurred in bouts. Our results indicate that subsurface behaviour in short-finned pilot whales is more complex than a simple dichotomy of deep and shallow diving states, and labelling all subsurface behaviour as deep dives or shallow dives discounts a significant amount of important variation. We discuss potential drivers of these patterns, including variation in foraging success, prey availability and selection, bathymetry, physiological constraints and socially mediated behaviour.

Publication:Ocean:Region:Species:Methods:
Current
Behavioral Response Analysis of Two Populations of Short-Finned Pilot Whales to Mid-Frequency Active Sonar
Project Objectives
Utilize newly developed statistical methods from the Atlantic BRS project and apply them to all the satellite-tagged pilot whales from both the Atlantic and Pacific studies.
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Complete
Behavioral Response Research Evaluation Workshop II (BRREW II)
Project Objectives
Response
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Current
Monitoring Cetaceans in Hood Canal
Project Objectives
This 12‑month integrated pilot project combines three complementary components: (A) shore‑based theodolite monitoring of harbor porpoises, (B) high‑bandwidth passive acoustic monitoring and soundscape characterization, and (C) suction‑cup multi‑sensor tag deployments on Bigg’s (transient) killer whales. Together, these data streams will quantify occurrence, movement, diving, and behavioral context for these two key species in relation to the local soundscape—including operational signals near the Dabob Bay Range Complex (DBRC) and the Bangor Trident Base. Results can provide an empirical foundation and inform the study design of future cetacean behavioral response studies (BRS) in Hood Canal.
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Kaua‘i field project - August 2026
August 25, 2026
Researchers from Cascadia Research Collective are conducting a 9-day field session off Kaua'i to deploy LIMPET satellite tags on odontocete cetaceans prior to a Submarine Command Course (SCC) to be able to examine their behavior before, during, and after the training event. Click on the image below to see daily updates from the field.
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Another CEE Trial – and Gervais’ beaked whales!
August 10, 2026
A second controlled exposure experiment trial with simulated Continuously Active Sonar (CAS) was conducted on August 1. In addition to the usual goose-beaked whales, we also had a sighting of less common Gervais' beaked whales.
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First CEE Trial of 2026 – and False Killer Whales
July 23, 2026
The Atlantic BRS team had an extremely productive day on Friday, July 17th with tags deployed on both false killer whales and goose-beaked whales, as well as a successful controlled exposure experiment with simulated Continuous Active Sonar signals.
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Atlantic BRS - First CEE of 2021
August 9, 2021
A team of researchers and Navy staff recently completed the first controlled exposure experiment of the 2021 field season for the Atlantic Behavioral Response Study.
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Atlantic Behavioral Response Study kicks off 2021 field season
July 13, 2021
The Atlantic Behavioral Response Study kicked off the 2021 field season last week by deploying the first round of satellite-linked telemetry tags on Cuvier's beaked whales.
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Atlantic BRS - First CEE of 2020
July 17, 2020
The first CEE of 2020 overcame the challenges of COVID-19.
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Atlantic BRS - Multi-scale CEE Success!
August 15, 2019
The first CEE while two different tag types were deployed.
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